rno-mir-21
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-21 5arm | 8226 | 2033 | 67879 | 87474 | 197496 | 140280 | 7627 | 17911 | 40902 | 33763 |
| rno-mir-21 3arm | 13 | 16 | 235 | 249 | 336 | 273 | 13 | 47 | 95 | 70 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-21 5arm | 0.273 | 0.089 | 3.676 | 5.188 | 9.619 | 10.632 | 0.593 | 0.943 | 2.697 | 2.246 |
| rno-mir-21 3arm | 0.000 | 0.001 | 0.013 | 0.015 | 0.016 | 0.021 | 0.001 | 0.002 | 0.006 | 0.005 |
sblock2453 (miRBase rno-mir-21) [miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase rno-mir-21 | 0.001 | no | no | 0.35/0.61 | 18/26/0.73 | 0.0 2.5 0.0 | 0.0 0.5 1.4 | 250498 2 930 | 0 0 0 | 10 2 10 | 0 0 0 | 17 22 14 | 5 -3 5 | 5arm 3arm 3arm | 1 1 1 | nd nd nd | 0.13 0.06 0.06 | 1 1 1 | 604938 | 10 | 2 | 3 |
| reads | miRBase family seed | |||||||||||
| seed | ----------------------AGCUUAU-------------------------------------------------------------------------------- | 593490 | miR-21 | |||||||||
| seed | -----------------------GCUUAUC------------------------------------------------------------------------------- | 9729 | novel | |||||||||
| seed | ------------------------------------------------------------AACAGCA------------------------------------------ | 1195 | miR-21* | |||||||||
| seed | ---------------------UAGCUUA--------------------------------------------------------------------------------- | 270 | novel | |||||||||
| seed | --------------------------------------------------------------CAGCAGU---------------------------------------- | 100 | novel | |||||||||
| seed | ------------------------CUUAUCA------------------------------------------------------------------------------ | 64 | novel | |||||||||
| seed | -------------------------------------------------------------ACAGCAG----------------------------------------- | 50 | novel | |||||||||
| seed | -------------------------UUAUCAG----------------------------------------------------------------------------- | 23 | novel | |||||||||
| seed | ---------------------------AUCAGAC--------------------------------------------------------------------------- | 8 | novel | |||||||||
| seed | --------------------------UAUCAGA---------------------------------------------------------------------------- | 7 | miR-361 | |||||||||
| seed | ---------------------------------------------------------GGCAACA--------------------------------------------- | 1 | novel | |||||||||
| seed | ----------------------------------------------------CUCAUGG-------------------------------------------------- | 1 | novel | |||||||||
| len | cloning frequencies | |||||||||||
| T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 | |||
| ---------------------TAGCTTATCAGACTGATGTTGAC----------------------------------------------------------------- | 23 | 5051 | 621 | 34236 | 43602 | 123230 | 83666 | 2721 | 7917 | 21632 | 19724 | |
| ---------------------TAGCTTATCAGACTGATG---------------------------------------------------------------------- | 18 | 1317 | 456 | 10429 | 17022 | 25465 | 23652 | 3722 | 6074 | 10444 | 5266 | |
| ---------------------TAGCTTATCAGACTGATGT--------------------------------------------------------------------- | 19 | 652 | 188 | 5657 | 8280 | 19647 | 12538 | 483 | 1240 | 2898 | 4511 | |
| ---------------------TAGCTTATCAGACTGATGTT-------------------------------------------------------------------- | 20 | 545 | 406 | 8273 | 10017 | 16365 | 9076 | 302 | 1091 | 2391 | 1792 | |
| ---------------------TAGCTTATCAGACTGATGTTG------------------------------------------------------------------- | 21 | 214 | 176 | 3688 | 3972 | 4421 | 4962 | 148 | 741 | 1153 | 1115 | |
| rno-miR-21 | ---------------------TAGCTTATCAGACTGATGTTGA------------------------------------------------------------------ | 22 | 222 | 115 | 3129 | 1719 | 3840 | 3062 | 77 | 373 | 1222 | 618 |
| ----------------------AGCTTATCAGACTGATGTTGAC----------------------------------------------------------------- | 22 | 129 | 17 | 724 | 774 | 1993 | 1459 | 91 | 195 | 492 | 324 | |
| ---------------------TAGCTTATCAGACTGATGTTGACT---------------------------------------------------------------- | 24 | 41 | 15 | 1116 | 1447 | 1362 | 1030 | 36 | 143 | 362 | 207 | |
| ----------------------AGCTTATCAGACTGATGTT-------------------------------------------------------------------- | 19 | 17 | 22 | 284 | 295 | 437 | 290 | 15 | 56 | 102 | 38 | |
| ----------------------AGCTTATCAGACTGATGT--------------------------------------------------------------------- | 18 | 6 | 3 | 100 | 121 | 280 | 165 | 7 | 21 | 44 | 45 | |
| ----------------------AGCTTATCAGACTGATGTTG------------------------------------------------------------------- | 20 | 10 | 7 | 69 | 94 | 160 | 142 | 5 | 20 | 57 | 52 | |
| ----------------------AGCTTATCAGACTGATGTTGA------------------------------------------------------------------ | 21 | 3 | 4 | 95 | 44 | 110 | 71 | 7 | 13 | 45 | 14 | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCTG------------------------------ | 20 | 2 | 4 | 39 | 48 | 81 | 71 | 4 | 16 | 28 | 19 | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGC-------------------------------- | 18 | 1 | 5 | 27 | 44 | 58 | 56 | 6 | 9 | 10 | 12 | |
| rno-miR-21* | -----------------------------------------------------------CAACAGCAGTCGATGGGCTGTC---------------------------- | 22 | - | 1 | 54 | 54 | 63 | 25 | - | 6 | 13 | 9 |
| ----------------------AGCTTATCAGACTGATGTTGACT---------------------------------------------------------------- | 23 | 3 | - | 31 | 25 | 52 | 29 | 3 | 7 | 7 | 2 | |
| ---------------------TAGCTTATCAGACTGATGTTGACTG--------------------------------------------------------------- | 25 | 3 | - | 23 | 32 | 31 | 38 | 1 | 4 | 10 | 14 | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCT------------------------------- | 19 | 2 | 3 | 15 | 19 | 46 | 35 | 2 | 8 | 15 | 5 | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCTGT----------------------------- | 21 | - | 3 | 27 | 24 | 33 | 28 | - | 3 | 11 | 17 | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCTGTCT--------------------------- | 23 | 4 | - | 26 | 32 | 27 | 28 | 1 | 2 | 8 | 3 | |
| --------------------GTAGCTTATCAGACTGATG---------------------------------------------------------------------- | 19 | 7 | - | 6 | 7 | 25 | 30 | 2 | 3 | 12 | 11 | |
| --------------------GTAGCTTATCAGACTGATGTTGAC----------------------------------------------------------------- | 24 | 1 | - | 1 | 3 | 19 | 26 | - | 4 | 10 | 6 | |
| -----------------------GCTTATCAGACTGATGTTGAC----------------------------------------------------------------- | 21 | 1 | - | 4 | 8 | 16 | 10 | - | 2 | 3 | 5 | |
| -------------------------------------------------------------ACAGCAGTCGATGGGCTGTCT--------------------------- | 21 | - | - | 6 | 6 | 11 | 15 | - | - | 3 | 5 | |
| --------------------GTAGCTTATCAGACTGAT----------------------------------------------------------------------- | 18 | - | 2 | 3 | 2 | 6 | 9 | 2 | 2 | 7 | 5 | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCTGTCT--------------------------- | 22 | 2 | - | 10 | 4 | 2 | 3 | - | - | 3 | - | |
| --------------------GTAGCTTATCAGACTGATGT--------------------------------------------------------------------- | 20 | 1 | - | - | 2 | 10 | 5 | - | - | 2 | 3 | |
| --------------------GTAGCTTATCAGACTGATGTTG------------------------------------------------------------------- | 22 | - | - | 4 | 1 | 4 | 4 | 2 | 2 | 1 | 4 | |
| -------------------------------------------------------------ACAGCAGTCGATGGGCTGTC---------------------------- | 20 | - | - | 13 | 2 | 2 | 4 | - | 1 | - | - | |
| -------------------------------------------------------------ACAGCAGTCGATGGGCTG------------------------------ | 18 | - | - | 8 | 4 | 4 | 3 | - | 1 | 1 | - | |
| ------------------------CTTATCAGACTGATGTTGAC----------------------------------------------------------------- | 20 | - | - | 2 | - | 8 | 2 | - | - | 3 | - | |
| -------------------------------------------------------------ACAGCAGTCGATGGGCTGT----------------------------- | 19 | - | - | 2 | 4 | 3 | 1 | - | - | 1 | - | |
| ---------------------TAGCTTATCAGACTGATGTTGACTGT-------------------------------------------------------------- | 26 | - | - | 1 | 1 | 1 | 2 | - | - | 3 | 1 | |
| --------------------------TATCAGACTGATGTTGAC----------------------------------------------------------------- | 18 | 1 | - | 1 | 2 | 2 | 1 | - | - | - | 1 | |
| -----------------------GCTTATCAGACTGATGTTG------------------------------------------------------------------- | 19 | 1 | 1 | 1 | - | 3 | 1 | - | - | - | - | |
| --------------------GTAGCTTATCAGACTGATGTT-------------------------------------------------------------------- | 21 | - | - | - | 1 | 1 | 2 | - | - | 1 | 2 | |
| -------------------------TTATCAGACTGATGTTGAC----------------------------------------------------------------- | 19 | - | - | - | 1 | 2 | 1 | 1 | 1 | - | 1 | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCTG------------------------------ | 19 | 2 | - | - | - | 2 | 3 | - | - | - | - | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCTGT----------------------------- | 20 | - | - | 2 | 2 | 2 | - | - | - | 1 | - | |
| -----------------------GCTTATCAGACTGATGTT-------------------------------------------------------------------- | 18 | 1 | - | 1 | - | 2 | 2 | - | - | - | - | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCTGTC---------------------------- | 21 | - | - | 2 | 3 | 1 | - | - | - | - | - | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCT------------------------------- | 18 | - | - | 2 | 3 | - | - | - | - | - | - | |
| ------------------------CTTATCAGACTGATGTTGACT---------------------------------------------------------------- | 21 | - | - | - | - | 3 | 1 | - | 1 | - | - | |
| --------------------GTAGCTTATCAGACTGATGTTGA------------------------------------------------------------------ | 23 | - | - | 1 | 1 | - | - | - | - | - | 2 | |
| --------------------GTAGCTTATCAGACTGATGTTGACT---------------------------------------------------------------- | 25 | - | - | - | - | - | 1 | 2 | - | - | - | |
| ----------------------AGCTTATCAGACTGATGTTGACTG--------------------------------------------------------------- | 24 | - | - | - | - | 1 | - | - | 1 | - | - | |
| -----------------------GCTTATCAGACTGATGTTGACT---------------------------------------------------------------- | 22 | - | - | - | - | - | 2 | - | - | - | - | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCTGTCTGAC------------------------ | 26 | - | - | 2 | - | - | - | - | - | - | - | |
| ------------------------CTTATCAGACTGATGTTG------------------------------------------------------------------- | 18 | - | - | - | - | - | 1 | - | - | 1 | - | |
| -----------------------------------------------------------CAACAGCAGTCGATGGGCTGTCTG-------------------------- | 24 | - | - | - | - | - | 1 | - | - | - | - | |
| --------------------------------------------------------TGGCAACAGCAGTCGATG----------------------------------- | 18 | - | - | - | - | - | - | - | 1 | - | - | |
| ------------------------CTTATCAGACTGATGTTGA------------------------------------------------------------------ | 19 | - | - | - | 1 | - | - | - | - | - | - | |
| ------------------------------------------------------------AACAGCAGTCGATGGGCTGTCTG-------------------------- | 23 | - | - | - | - | - | - | - | - | 1 | - | |
| ---------------------------------------------------TCTCATGGCAACAGCAGTCGAT------------------------------------ | 22 | - | - | - | - | 1 | - | - | - | - | - | |
| rat | ----TGTACCACCTTGTCGGGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACAGCAGTCGATGGGCTGTCTGACATTTTGGTATC------------- | |||||||||||
| human | -----GTACCACCTTGTCGGGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTGACATTTTGGTAT-------------- | |||||||||||
| mouse | TGGCTGTACCACCTTGTCGGATAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACAGCAGTCGATGGGCTGTCTGACATTTTGGTATCTTTCATCTGACCA | |||||||||||
| *************** ******************************************* ****************************** | ||||||||||||
| ..... >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ..... | ENSRNOT00000053603 ENSRNOG00000035480 rno-mir-21 | |||||||||||
| rat | .((((((...((((((..((((((((.(((((.(((((.((((.(.....)))))))))).)))))))))))))..))))))...)))))). | 1.000 -43.60 | ||||||||||
| human | ((((((...((((((..((((((((.(((((.(((((.(((.((.....)))))))))).)))))))))))))..))))))...)))))) | 1.000 -43.30 | ||||||||||
| mouse | (((..((((((...((((((((((((((((.(((((.(((((.(((.((.....)))))))))).)))))))))))))))))))))...))))))...)))........ | 0.830 -46.40 | ||||||||||
| rat | chromosome:10:74864500:74864591:-1 | Same_strand|Exonic_non-coding|ENSRNOT00000053603|ENSRNOG00000035480 ## Same_strand|Boundary_non-coding|ENSRNOT00000053603|ENSRNOG00000035480 ## ENSRNOG00000035480|miRNA|rno-mir-21|rno-mir-21 [Source:miRBase;Acc:MI0000850] ## {MIR: rno-mir-21} |
| human | chromosome:17:55273400:55273489:1 | Same_strand|Boundary_non-coding|ENST00000362134|ENSG00000199004|miRNA|hsa-mir-21 [Source:miRBase;Acc:MI0000077] ## {MIR: hsa-mir-21} |
| mouse | chromosome:11:86397556:86397664:-1 | Same_strand|Boundary_non-coding|ENSMUST00000083521|ENSMUSG00000065455|miRNA|mmu-mir-21 [Source:miRBase;Acc:MI0000569] ## {MIR: mmu-mir-21} |
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