rno-mir-9-2-as
| absolute | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-9-2-as 5arm | 0.333 | 0.333 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| rno-mir-9-2-as 3arm | 3.333 | 0.333 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| normalized | T1S1 | T1S2 | T2S1 | T2S2 | T3S1 | T3S2 | T4S1 | T4S2 | T5S1 | T5S2 |
| rno-mir-9-2-as 5arm | 0.000 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| rno-mir-9-2-as 3arm | 0.000 | 0.000 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
sblock6315 (Antisense miRBase rno-mir-9-2-as) [miRBaseNonMapped_lenNOK_multiarm_DicerNOK_5varHIGH_loopOverlap_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBaseAS rno-mir-9-2-as | 0.001 | no | no | 0.32/0.39 | 18/23/0.57 | 0.0 2.0 | 0.5 0.8 | 2 5 | 0 0 | 2 2 | 0 0 | 34 29 | 2 -4 | 5arm 3arm | 3 3 | nd nd | 0.11 0.06 | 1 1 | 7 | 2 | -6 | -1 |
| Member of family novel57 (seed UCGGUUA): rno-mir-9-3, rno-mir-9-1, rno-mir-9-2 |
| reads | miRBase family seed | |||
| seed | ------------------------------------------------------------------CACUCAU---------------------------------------------------- | 3 | novel | |
| seed | -------------------------------------UCGGUUA--------------------------------------------------------------------------------- | 2 | novel | |
| seed | ----------------------------------------------------------------------CAUACAG------------------------------------------------ | 1 | novel | |
| seed | ------------------------------------------------------------------------UACAGCU---------------------------------------------- | 1 | novel | |
| len | cloning frequencies | |||
| T1S1 | T1S2 | |||
| -----------------------------------------------------------------ACACTCATACAGCTAGATAACCA------------------------------------- | 23 | 3 | - | |
| ------------------------------------TTCGGTTATCTAGCTTTA----------------------------------------------------------------------- | 18 | - | 1 | |
| -----------------------------------------------------------------------ATACAGCTAGATAACCAA------------------------------------ | 18 | 1 | - | |
| ---------------------------------------------------------------------TCATACAGCTAGATAACCAAAG---------------------------------- | 22 | - | 1 | |
| ------------------------------------TTCGGTTATCTAGCTTTAT---------------------------------------------------------------------- | 19 | 1 | - | |
| rat | --AGCACTCCTCGGTGATCTTGAAGGAGTTTTTACTTTCGGTTATCTAGCTTTATGAAGACCAATACACTCATACAGCTAGATAACCAAAGATAACAACTCGCTTCCCTCACAAGGCTGT----- | |||
| human | ------------GGCGATCTTGAAGGAGTTTTTACTTTCGGTTATCTAGCTTTATGAAGACCAATACACTCATACAGCTAGATAACCAAAGATAACAACTCGCTTC------------------- | |||
| mouse | GGAACGTTCCTCGGTGACCTTGAAGGAGTTTTTACTTTCGGTTATCTAGCTTTATGAAGACCAATACACTCATACAGCTAGATAACCAAAGATAACAACTCGCTTCCCTCACAAGGCTGCCTTCC | |||
| ** ** **************************************************************************************** | ||||
| ..... ..................<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<............. ..... | ENSRNOT00000053751 ENSRNOG00000035628 rno-mir-9-2 | |||
| rat | .(((..(((..((((....(((((((((.(((((((.((((((((((((.(((((............))))).)))))))))))))))).))).))))).))))..)))).))).))) | 1.000 -42.20 | ||
| human | .........(((((((((.(((((((.((((((((((((.(((((............))))).)))))))))))))))).))).))))).)))) | 0.984 -34.80 | ||
| mouse | ((((.((.(((..((((....(((((((((.(((((((.((((((((((((.(((((............))))).)))))))))))))))).))).))))).))))..)))).)))..)).)))) | 0.935 -46.70 | ||
| rat | chromosome:2:12259488:12259605:1 | Opposite_strand|Exonic_non-coding|ENSRNOT00000053751|ENSRNOG00000035628 ## ENSRNOG00000035628|miRNA|rno-mir-9-2|rno-mir-9-2 [Source:miRBase;Acc:MI0000840] ## {ASMIR: rno-mir-9-2-as} |
| human | chromosome:5:87998419:87998512:1 | Opposite_strand|Boundary_non-coding|ENST00000384838|ENSG00000207570|miRNA|hsa-mir-9-2 [Source:miRBase;Acc:MI0000467] ## {ASMIR: hsa-mir-9-2-as} |
| mouse | chromosome:13:83878393:83878517:-1 | Opposite_strand|Boundary_non-coding|ENSMUST00000083490|ENSMUSG00000065424|miRNA|mmu-mir-9-2 [Source:miRBase;Acc:MI0000157] ## {ASMIR: mmu-mir-9-2-as} |
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